Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 AL512356.2-201ENST00000546955 174 ntBASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 MIR4453-201ENST00000584019 89 ntBASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 MIR6080-201ENST00000617359 66 ntBASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSPG4P5Q96PW8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 CICP13-201ENST00000422015 2789 ntBASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 AL133215.2-201ENST00000609242 977 ntBASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 LINC00628-201ENST00000628516 1289 ntBASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSPG4P5Q96PW8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CSPG4P5Q96PW8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 AL139400.1-201ENST00000366220 510 ntBASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 HLA-J-203ENST00000494367 1087 ntBASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 AC109322.1-201ENST00000524499 1264 ntBASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 AC079781.4-201ENST00000641908 219 ntBASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.51■□□□□ 0.23
CSPG4P5Q96PW8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms