Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.01□□□□□ -0.01
MS4A4EQ96PG1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 AP3S2-216ENST00000617003 1561 ntBASIC15□□□□□ -0.01
MS4A4EQ96PG1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 AC004987.2-201ENST00000395959 1148 ntBASIC15□□□□□ -0.01
MS4A4EQ96PG1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 UPF3AP3-201ENST00000420996 769 ntBASIC15□□□□□ -0.01
MS4A4EQ96PG1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 RARRES2P9-201ENST00000565168 469 ntBASIC15□□□□□ -0.01
MS4A4EQ96PG1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MS4A4EQ96PG1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15□□□□□ -0.01
MS4A4EQ96PG1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 RPSAP43-201ENST00000402237 625 ntBASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 AC004461.1-201ENST00000412461 403 ntBASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 AL627223.1-201ENST00000416693 442 ntBASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 AL139010.1-201ENST00000454878 894 ntBASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MS4A4EQ96PG1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MS4A4EQ96PG1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
MS4A4EQ96PG1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MS4A4EQ96PG1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.98□□□□□ -0.01
MS4A4EQ96PG1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MS4A4EQ96PG1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms