Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 AC067930.6-201ENST00000623257 4947 ntBASIC15.25■□□□□ 0.03
COL21A1Q96P44 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL21A1Q96P44 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.25■□□□□ 0.03
COL21A1Q96P44 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 AKAP8P1-201ENST00000434743 1349 ntBASIC15.24■□□□□ 0.03
COL21A1Q96P44 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 MIR648-201ENST00000385046 94 ntBASIC15.24■□□□□ 0.03
COL21A1Q96P44 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 YBX1P5-201ENST00000509441 847 ntBASIC15.24■□□□□ 0.03
COL21A1Q96P44 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 U82695.1-201ENST00000635752 1889 ntBASIC15.24■□□□□ 0.03
COL21A1Q96P44 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 AC112504.1-201ENST00000623415 1841 ntBASIC15.24■□□□□ 0.03
COL21A1Q96P44 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL21A1Q96P44 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL21A1Q96P44 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AC006058.4-201ENST00000624016 1670 ntBASIC15.23■□□□□ 0.03
COL21A1Q96P44 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 TFAMP1-201ENST00000412727 736 ntBASIC15.23■□□□□ 0.03
COL21A1Q96P44 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 RN7SL589P-201ENST00000481268 310 ntBASIC15.23■□□□□ 0.03
COL21A1Q96P44 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 MIR4469-201ENST00000583919 79 ntBASIC15.23■□□□□ 0.03
COL21A1Q96P44 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AP005117.1-202ENST00000581724 1908 ntBASIC15.23■□□□□ 0.03
COL21A1Q96P44 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 AC069224.1-201ENST00000566372 1715 ntBASIC15.23■□□□□ 0.03
COL21A1Q96P44 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
COL21A1Q96P44 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL21A1Q96P44 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms