Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AL645939.2-201ENST00000427340 991 ntBASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 KRT18P57-201ENST00000443599 1254 ntBASIC13.86□□□□□ -0.19
CMTM3Q96MX0 TOB2P1-201ENST00000469761 992 ntBASIC13.86□□□□□ -0.19
CMTM3Q96MX0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 AJ011931.1-201ENST00000618749 2492 ntBASIC13.85□□□□□ -0.19
CMTM3Q96MX0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 AC106795.1-205ENST00000512851 1056 ntBASIC13.85□□□□□ -0.19
CMTM3Q96MX0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 AC022616.7-201ENST00000525383 220 ntBASIC13.85□□□□□ -0.19
CMTM3Q96MX0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 NKAPP1-205ENST00000585790 367 ntBASIC13.85□□□□□ -0.19
CMTM3Q96MX0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CMTM3Q96MX0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ZBED1P1-201ENST00000502364 1930 ntBASIC13.84□□□□□ -0.19
CMTM3Q96MX0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms