Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AL592424.1-201ENST00000563624 1536 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.06■□□□□ 0.16
SHDQ96IW2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 AC006001.1-201ENST00000325130 474 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.06■□□□□ 0.16
SHDQ96IW2 KRT18P64-201ENST00000434946 1219 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 AKR7A2P1-201ENST00000460134 915 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 KRT18P43-201ENST00000469825 1281 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.06■□□□□ 0.16
SHDQ96IW2 KRT18P25-201ENST00000508931 1278 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.06■□□□□ 0.16
SHDQ96IW2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.06■□□□□ 0.16
SHDQ96IW2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.06■□□□□ 0.16
SHDQ96IW2 AC000095.1-201ENST00000603208 874 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.06■□□□□ 0.16
SHDQ96IW2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.06■□□□□ 0.16
SHDQ96IW2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.06■□□□□ 0.16
SHDQ96IW2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SHDQ96IW2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
SHDQ96IW2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHDQ96IW2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.06■□□□□ 0.16
SHDQ96IW2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.06■□□□□ 0.16
SHDQ96IW2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SHDQ96IW2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.05■□□□□ 0.16
SHDQ96IW2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.05■□□□□ 0.16
SHDQ96IW2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.05■□□□□ 0.16
SHDQ96IW2 AC138028.6-201ENST00000616106 1482 ntBASIC16.05■□□□□ 0.16
SHDQ96IW2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.05■□□□□ 0.16
SHDQ96IW2 AHCYP2-201ENST00000430630 1300 ntBASIC16.05■□□□□ 0.16
SHDQ96IW2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.05■□□□□ 0.16
SHDQ96IW2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.05■□□□□ 0.16
SHDQ96IW2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.05■□□□□ 0.16
SHDQ96IW2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.05■□□□□ 0.16
SHDQ96IW2 AC004898.1-201ENST00000451057 766 ntBASIC16.05■□□□□ 0.16
SHDQ96IW2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.05■□□□□ 0.16
SHDQ96IW2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.05■□□□□ 0.16
SHDQ96IW2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.05■□□□□ 0.16
SHDQ96IW2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.05■□□□□ 0.16
SHDQ96IW2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.05■□□□□ 0.16
SHDQ96IW2 GNRHR2-203ENST00000581100 1187 ntBASIC16.05■□□□□ 0.16
SHDQ96IW2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.05■□□□□ 0.16
SHDQ96IW2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.05■□□□□ 0.16
SHDQ96IW2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.05■□□□□ 0.16
SHDQ96IW2 AL008638.5-201ENST00000623814 1298 ntBASIC16.05■□□□□ 0.16
SHDQ96IW2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHDQ96IW2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.05■□□□□ 0.16
SHDQ96IW2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SHDQ96IW2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SHDQ96IW2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SHDQ96IW2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.04■□□□□ 0.16
SHDQ96IW2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.04■□□□□ 0.16
SHDQ96IW2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
SHDQ96IW2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.04■□□□□ 0.16
SHDQ96IW2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.04■□□□□ 0.16
SHDQ96IW2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 AL133373.2-201ENST00000623187 2828 ntBASIC16.04■□□□□ 0.16
SHDQ96IW2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SHDQ96IW2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SHDQ96IW2 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.04■□□□□ 0.16
SHDQ96IW2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.04■□□□□ 0.16
SHDQ96IW2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHDQ96IW2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.04■□□□□ 0.16
SHDQ96IW2 AC026410.3-201ENST00000514280 936 ntBASIC16.04■□□□□ 0.16
SHDQ96IW2 SCARNA20.5-201ENST00000516991 142 ntBASIC16.04■□□□□ 0.16
SHDQ96IW2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms