Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 AC105021.1-202ENST00000570572 669 ntBASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 AC010327.4-202ENST00000591484 748 ntBASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 AC009093.7-201ENST00000623853 1223 ntBASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 CICP13-201ENST00000422015 2789 ntBASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM5Q96HC4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 FO393414.2-201ENST00000405153 598 ntBASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 AC097359.3-201ENST00000603982 1210 ntBASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 AC007967.4-201ENST00000614700 386 ntBASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 AC090616.6-203ENST00000579186 1945 ntBASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM5Q96HC4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AL035456.1-201ENST00000456064 1369 ntBASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms