Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TTC9Q92623 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TTC9Q92623 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9Q92623 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC9Q92623 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TTC9Q92623 AC104640.1-201ENST00000562617 2109 ntBASIC15.31■□□□□ 0.04
TTC9Q92623 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TTC9Q92623 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC9Q92623 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TTC9Q92623 AL080243.2-201ENST00000418783 582 ntBASIC15.31■□□□□ 0.04
TTC9Q92623 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC9Q92623 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TTC9Q92623 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TTC9Q92623 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
TTC9Q92623 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TTC9Q92623 HYMAI-201ENST00000635591 3347 ntBASIC15.31■□□□□ 0.04
TTC9Q92623 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC9Q92623 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9Q92623 AL603756.1-201ENST00000606511 2163 ntBASIC15.31■□□□□ 0.04
TTC9Q92623 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TTC9Q92623 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9Q92623 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TTC9Q92623 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TTC9Q92623 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 AC092933.1-201ENST00000393644 945 ntBASIC15.3■□□□□ 0.04
TTC9Q92623 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TTC9Q92623 HAUS4P1-201ENST00000406739 1145 ntBASIC15.3■□□□□ 0.04
TTC9Q92623 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.3■□□□□ 0.04
TTC9Q92623 TMEM14DP-201ENST00000422205 345 ntBASIC15.3■□□□□ 0.04
TTC9Q92623 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC9Q92623 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC9Q92623 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9Q92623 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TTC9Q92623 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 AC055876.2-201ENST00000531834 546 ntBASIC15.3■□□□□ 0.04
TTC9Q92623 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9Q92623 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 BANF1P1-201ENST00000553684 263 ntBASIC15.3■□□□□ 0.04
TTC9Q92623 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9Q92623 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9Q92623 AL133215.2-201ENST00000609242 977 ntBASIC15.3■□□□□ 0.04
TTC9Q92623 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC9Q92623 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms