Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 AC012313.1-201ENST00000593393 3059 ntBASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAPGEF4Q8WZA2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 AC012441.1-201ENST00000446669 685 ntBASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 AP001063.1-201ENST00000568332 529 ntBASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 AL606495.2-201ENST00000605867 535 ntBASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 GPR182-203ENST00000622922 591 ntBASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 ME2P1-201ENST00000426028 1970 ntBASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RAPGEF4Q8WZA2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC134312.5-201ENST00000568031 1313 ntBASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 ALOX12P2-203ENST00000570921 1945 ntBASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 FTH1P14-201ENST00000482930 551 ntBASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC005252.2-201ENST00000624630 1141 ntBASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.85■□□□□ 0.93
RAPGEF4Q8WZA2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 MSTO2P-201ENST00000314835 1709 ntBASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 AL133338.1-201ENST00000565695 1517 ntBASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 AC093433.1-201ENST00000458048 571 ntBASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms