Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40AQ8WXH6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 AC136621.1-201ENST00000624017 2304 ntBASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40AQ8WXH6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 AC131009.4-201ENST00000624048 1740 ntBASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.18□□□□□ -0.14
RAB40AQ8WXH6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms