Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AL158047.1-201ENST00000445918 881 ntBASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 RN7SL606P-201ENST00000472779 293 ntBASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 PMPCAP1-201ENST00000508114 1576 ntBASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AC092127.1-201ENST00000567093 3455 ntBASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SMIM11BQ8TCY0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 AJ011931.1-201ENST00000618749 2492 ntBASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 AL355075.4-201ENST00000554988 638 ntBASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 AC011467.2-201ENST00000598425 242 ntBASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 AL592071.1-201ENST00000611956 408 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms