Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 AL671883.3-201ENST00000603274 991 ntBASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 AL645728.2-201ENST00000641974 660 ntBASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 AP005117.1-202ENST00000581724 1908 ntBASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 AL596087.1-201ENST00000400979 1969 ntBASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 SNX33P1-201ENST00000592116 1762 ntBASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP61Q8NHU2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 SBF1P1-201ENST00000444527 5631 ntBASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 HLA-J-202ENST00000469281 1241 ntBASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 PMS2P7-201ENST00000506558 1336 ntBASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 OR2I1P-210ENST00000642037 4691 ntBASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 KRT8P39-201ENST00000396270 1433 ntBASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFAP61Q8NHU2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFAP61Q8NHU2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms