Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 PCDHA12-202ENST00000613593 2588 ntBASIC19.61■□□□□ 0.73
RTL9Q8NET4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.61■□□□□ 0.73
RTL9Q8NET4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 AL607033.1-201ENST00000623900 1599 ntBASIC19.61■□□□□ 0.73
RTL9Q8NET4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.61■□□□□ 0.73
RTL9Q8NET4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL9Q8NET4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL9Q8NET4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL9Q8NET4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 AC234783.1-201ENST00000441761 496 ntBASIC19.6■□□□□ 0.73
RTL9Q8NET4 BNIP3P42-201ENST00000454982 569 ntBASIC19.6■□□□□ 0.73
RTL9Q8NET4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 MIR5189-201ENST00000577370 114 ntBASIC19.6■□□□□ 0.73
RTL9Q8NET4 BNIP3P29-201ENST00000598302 571 ntBASIC19.6■□□□□ 0.73
RTL9Q8NET4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 AC011447.5-201ENST00000616168 564 ntBASIC19.6■□□□□ 0.73
RTL9Q8NET4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL9Q8NET4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL9Q8NET4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL9Q8NET4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL9Q8NET4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL9Q8NET4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL9Q8NET4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 INTS4P2-202ENST00000614726 2019 ntBASIC19.59■□□□□ 0.73
RTL9Q8NET4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.59■□□□□ 0.73
RTL9Q8NET4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 AP005482.1-201ENST00000563722 1273 ntBASIC19.59■□□□□ 0.73
RTL9Q8NET4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTL9Q8NET4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.59■□□□□ 0.73
RTL9Q8NET4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 FAM86MP-201ENST00000340703 885 ntBASIC19.58■□□□□ 0.73
RTL9Q8NET4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTL9Q8NET4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
RTL9Q8NET4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms