Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 UPF3AP2-201ENST00000457924 1132 ntBASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 AC004898.1-201ENST00000451057 766 ntBASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 AL591846.1-201ENST00000451736 433 ntBASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 RPS2P36-201ENST00000456516 831 ntBASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC24.62■■□□□ 1.53
CFAP43Q8NDM7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 EIF4HP1-201ENST00000453115 687 ntBASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 VDAC1P7-201ENST00000462417 847 ntBASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 AP006547.1-201ENST00000563435 692 ntBASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 MIR4722-201ENST00000578292 60 ntBASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC24.61■■□□□ 1.53
CFAP43Q8NDM7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 TMEM198B-204ENST00000484016 896 ntBASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 HIST2H2BC-201ENST00000498492 580 ntBASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 AP001063.1-201ENST00000568332 529 ntBASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CFAP43Q8NDM7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 ADM-202ENST00000524948 584 ntTSL 2 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 AC025279.2-201ENST00000569730 653 ntBASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CFAP43Q8NDM7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms