Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL009178.2-201ENST00000597278 2719 ntBASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 AC096734.2-201ENST00000562054 433 ntBASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 AC092919.2-201ENST00000623631 1645 ntBASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC50Q8IVM0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 KRT18P34-201ENST00000488218 1270 ntBASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 IGHV3-22-201ENST00000520721 359 ntBASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 AL009183.1-201ENST00000603760 355 ntBASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 AC023141.13-201ENST00000604991 943 ntBASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 AC007064.4-201ENST00000637740 555 ntBASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC50Q8IVM0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 AL662844.1-201ENST00000546340 181 ntBASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 KRT126P-201ENST00000549467 1181 ntBASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC50Q8IVM0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms