Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 C18orf15-201ENST00000623680 2534 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 AC091951.1-201ENST00000512854 2465 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TSPY19P-201ENST00000418461 509 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 RPS2P1-201ENST00000434010 821 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TSPY18P-201ENST00000441642 509 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 OR7E14P-202ENST00000530490 1290 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 AC093458.2-201ENST00000623150 629 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 AP001282.1-201ENST00000531301 1499 ntBASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AF238378.1-201ENST00000526806 358 ntBASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 AC106881.1-201ENST00000605849 3329 ntBASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms