Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS6Q7L5N1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 PKD1P1-201ENST00000458669 6805 ntBASIC20.11■□□□□ 0.81
COPS6Q7L5N1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 SLED1-202ENST00000512051 380 ntBASIC20.11■□□□□ 0.81
COPS6Q7L5N1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 KRT17P8-201ENST00000540749 863 ntBASIC20.11■□□□□ 0.81
COPS6Q7L5N1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COPS6Q7L5N1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 ACA64.2-201ENST00000459014 129 ntBASIC20.1■□□□□ 0.81
COPS6Q7L5N1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 AC106886.1-201ENST00000568660 600 ntBASIC20.1■□□□□ 0.81
COPS6Q7L5N1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS6Q7L5N1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.09■□□□□ 0.81
COPS6Q7L5N1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms