Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 AL021920.2-201ENST00000624828 1351 ntBASIC14.92□□□□□ -0.02
TUBA1AQ71U36 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 AC016027.1-202ENST00000607927 1699 ntBASIC14.92□□□□□ -0.02
TUBA1AQ71U36 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.92□□□□□ -0.02
TUBA1AQ71U36 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 AC026748.1-201ENST00000624349 3251 ntBASIC14.91□□□□□ -0.02
TUBA1AQ71U36 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 SLC25A6P2-201ENST00000497974 877 ntBASIC14.91□□□□□ -0.02
TUBA1AQ71U36 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 AL671883.3-201ENST00000603274 991 ntBASIC14.91□□□□□ -0.02
TUBA1AQ71U36 AC140113.2-201ENST00000604370 208 ntBASIC14.91□□□□□ -0.02
TUBA1AQ71U36 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 SNX18-202ENST00000343017 3140 ntBASIC14.91□□□□□ -0.02
TUBA1AQ71U36 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 TMBIM7P-203ENST00000641617 1718 ntBASIC14.91□□□□□ -0.02
TUBA1AQ71U36 AC023908.3-201ENST00000564211 3047 ntBASIC14.91□□□□□ -0.02
TUBA1AQ71U36 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TUBA1AQ71U36 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 AL109954.1-202ENST00000564051 2148 ntBASIC14.9□□□□□ -0.02
TUBA1AQ71U36 AL359183.1-201ENST00000623796 2132 ntBASIC14.9□□□□□ -0.02
TUBA1AQ71U36 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 MIR574-201ENST00000385209 96 ntBASIC14.9□□□□□ -0.02
TUBA1AQ71U36 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 CRYGEP-201ENST00000412192 528 ntBASIC14.9□□□□□ -0.02
TUBA1AQ71U36 MED15P5-201ENST00000423150 992 ntBASIC14.9□□□□□ -0.02
TUBA1AQ71U36 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 PAWRP1-201ENST00000451083 565 ntBASIC14.9□□□□□ -0.02
TUBA1AQ71U36 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBA1AQ71U36 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms