Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP50Q70EL3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
USP50Q70EL3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.61■□□□□ 0.57
USP50Q70EL3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.61■□□□□ 0.57
USP50Q70EL3 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.61■□□□□ 0.57
USP50Q70EL3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.61■□□□□ 0.57
USP50Q70EL3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 Z97180.1-201ENST00000445173 988 ntBASIC18.61■□□□□ 0.57
USP50Q70EL3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 AC008267.1-201ENST00000474858 1069 ntBASIC18.61■□□□□ 0.57
USP50Q70EL3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.61■□□□□ 0.57
USP50Q70EL3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.61■□□□□ 0.57
USP50Q70EL3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 FGFR3P5-201ENST00000564496 886 ntBASIC18.61■□□□□ 0.57
USP50Q70EL3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.61■□□□□ 0.57
USP50Q70EL3 AC079336.7-201ENST00000623428 1078 ntBASIC18.61■□□□□ 0.57
USP50Q70EL3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.61■□□□□ 0.57
USP50Q70EL3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.61■□□□□ 0.57
USP50Q70EL3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP50Q70EL3 AC060834.1-201ENST00000443027 2032 ntBASIC18.61■□□□□ 0.57
USP50Q70EL3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.6■□□□□ 0.57
USP50Q70EL3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP50Q70EL3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
USP50Q70EL3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.6■□□□□ 0.57
USP50Q70EL3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.6■□□□□ 0.57
USP50Q70EL3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.6■□□□□ 0.57
USP50Q70EL3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
USP50Q70EL3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
USP50Q70EL3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.6■□□□□ 0.57
USP50Q70EL3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.6■□□□□ 0.57
USP50Q70EL3 AC114812.1-204ENST00000449669 728 ntBASIC18.6■□□□□ 0.57
USP50Q70EL3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.6■□□□□ 0.57
USP50Q70EL3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.6■□□□□ 0.57
USP50Q70EL3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 AC134407.2-201ENST00000625089 1978 ntBASIC18.6■□□□□ 0.57
USP50Q70EL3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP50Q70EL3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.6■□□□□ 0.57
USP50Q70EL3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.6■□□□□ 0.57
USP50Q70EL3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP50Q70EL3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.6■□□□□ 0.57
USP50Q70EL3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
USP50Q70EL3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.6■□□□□ 0.57
USP50Q70EL3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.59■□□□□ 0.57
USP50Q70EL3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
USP50Q70EL3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.59■□□□□ 0.57
USP50Q70EL3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.59■□□□□ 0.57
USP50Q70EL3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.59■□□□□ 0.57
USP50Q70EL3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.59■□□□□ 0.57
USP50Q70EL3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.59■□□□□ 0.57
USP50Q70EL3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.59■□□□□ 0.57
USP50Q70EL3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
USP50Q70EL3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.59■□□□□ 0.57
USP50Q70EL3 RN7SL774P-201ENST00000577467 290 ntBASIC18.59■□□□□ 0.57
USP50Q70EL3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
USP50Q70EL3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.59■□□□□ 0.57
USP50Q70EL3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP50Q70EL3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms