Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 MIR7706-201ENST00000613747 67 ntBASIC16.22■□□□□ 0.19
RAPH1Q70E73 AL031008.1-201ENST00000619963 541 ntBASIC16.22■□□□□ 0.19
RAPH1Q70E73 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 AC092919.2-201ENST00000623631 1645 ntBASIC16.22■□□□□ 0.19
RAPH1Q70E73 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAPH1Q70E73 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 UNC93B6-202ENST00000528242 690 ntBASIC16.21■□□□□ 0.19
RAPH1Q70E73 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 AC116407.3-201ENST00000623905 1129 ntBASIC16.21■□□□□ 0.19
RAPH1Q70E73 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAPH1Q70E73 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
RAPH1Q70E73 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAPH1Q70E73 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAPH1Q70E73 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.21■□□□□ 0.18
RAPH1Q70E73 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RAPH1Q70E73 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAPH1Q70E73 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RAPH1Q70E73 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAPH1Q70E73 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.2■□□□□ 0.18
RAPH1Q70E73 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms