Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AL133338.1-201ENST00000565695 1517 ntBASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 RPL13P2-201ENST00000440687 659 ntBASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 USP32P1-208ENST00000506594 1164 ntBASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 RN7SL219P-201ENST00000582872 296 ntBASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC149Q6ZUS6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 AL162726.2-201ENST00000438986 1017 ntBASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 AP001282.1-201ENST00000531301 1499 ntBASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 REXO1L8P-201ENST00000604378 1897 ntBASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC149Q6ZUS6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC149Q6ZUS6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC149Q6ZUS6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms