Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 AC073621.1-201ENST00000392730 636 ntBASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 KRT18P27-201ENST00000427733 1299 ntBASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXR1Q6PIV2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
FOXR1Q6PIV2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 SPDYE21P-201ENST00000413323 827 ntBASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 CICP20-201ENST00000443330 2801 ntBASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 MIR4469-201ENST00000583919 79 ntBASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXR1Q6PIV2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXR1Q6PIV2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms