Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 AL592424.1-201ENST00000563624 1536 ntBASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 LINC00554-201ENST00000564841 3011 ntBASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 MIR4453-201ENST00000584019 89 ntBASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 HYMAI-201ENST00000635591 3347 ntBASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC39BQ5VTQ0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AC245100.5-201ENST00000452108 331 ntBASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 MIR4321-201ENST00000592276 80 ntBASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AL158211.3-201ENST00000607385 239 ntBASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AC093512.1-201ENST00000617969 520 ntBASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC39BQ5VTQ0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC39BQ5VTQ0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms