Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 AP003392.6-201ENST00000607709 325 ntBASIC13.69□□□□□ -0.22
LRRK2Q5S007 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 MIR4754-201ENST00000582477 89 ntBASIC13.69□□□□□ -0.22
LRRK2Q5S007 AC007881.3-201ENST00000608897 607 ntBASIC13.69□□□□□ -0.22
LRRK2Q5S007 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 AL603756.1-201ENST00000606511 2163 ntBASIC13.68□□□□□ -0.22
LRRK2Q5S007 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 PDIA3P2-201ENST00000428073 158 ntBASIC13.68□□□□□ -0.22
LRRK2Q5S007 AC078991.1-201ENST00000437297 610 ntBASIC13.68□□□□□ -0.22
LRRK2Q5S007 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRK2Q5S007 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRK2Q5S007 REXO1L1P-202ENST00000608646 1974 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 TPM3P8-201ENST00000330554 643 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 RN7SKP214-201ENST00000364208 315 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AC011742.3-201ENST00000439053 820 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 AC006335.1-201ENST00000445200 547 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AL022344.2-201ENST00000568976 968 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms