Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AL136379.1-201ENST00000623471 2642 ntBASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC144BQ3MJ40 AC006277.1-201ENST00000624348 1610 ntBASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 RPL37AP1-201ENST00000412502 279 ntBASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 RN7SL828P-201ENST00000607615 303 ntBASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 CETN4P-206ENST00000642099 2168 ntBASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AC087499.5-201ENST00000452760 1342 ntBASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC144BQ3MJ40 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 COX5BP8-201ENST00000416911 349 ntBASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 HLA-J-202ENST00000469281 1241 ntBASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 AC098859.1-201ENST00000502915 1238 ntBASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC144BQ3MJ40 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms