Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 AL136982.4-201ENST00000437689 1740 ntBASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 AC016700.1-201ENST00000429424 312 ntBASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 AC022137.2-201ENST00000503482 481 ntBASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 PGAM1P5-201ENST00000548011 764 ntBASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 AC006277.1-201ENST00000624348 1610 ntBASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.42■□□□□ 0.06
RSPO4Q2I0M5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 RPL13AP19-201ENST00000434320 584 ntBASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 KRT18P66-201ENST00000452970 1269 ntBASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 RN7SL11P-201ENST00000471305 293 ntBASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 AL133499.1-201ENST00000596207 608 ntBASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO4Q2I0M5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms