Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RPSAP43-201ENST00000402237 625 ntBASIC15.21■□□□□ 0.03
RAE1P78406 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAE1P78406 AL627223.1-201ENST00000416693 442 ntBASIC15.21■□□□□ 0.03
RAE1P78406 GPS2P2-201ENST00000430745 888 ntBASIC15.21■□□□□ 0.03
RAE1P78406 AC005237.2-201ENST00000434368 219 ntBASIC15.21■□□□□ 0.03
RAE1P78406 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.21■□□□□ 0.03
RAE1P78406 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.21■□□□□ 0.03
RAE1P78406 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.21■□□□□ 0.03
RAE1P78406 ALG1L8P-201ENST00000533887 760 ntBASIC15.21■□□□□ 0.03
RAE1P78406 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.21■□□□□ 0.03
RAE1P78406 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.21■□□□□ 0.03
RAE1P78406 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAE1P78406 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RAE1P78406 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAE1P78406 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.21■□□□□ 0.02
RAE1P78406 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
RAE1P78406 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.21■□□□□ 0.02
RAE1P78406 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAE1P78406 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAE1P78406 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.21■□□□□ 0.02
RAE1P78406 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.2■□□□□ 0.02
RAE1P78406 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.2■□□□□ 0.02
RAE1P78406 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.2■□□□□ 0.02
RAE1P78406 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.2■□□□□ 0.02
RAE1P78406 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.2■□□□□ 0.02
RAE1P78406 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAE1P78406 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.2■□□□□ 0.02
RAE1P78406 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.2■□□□□ 0.02
RAE1P78406 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RAE1P78406 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.2■□□□□ 0.02
RAE1P78406 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAE1P78406 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAE1P78406 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAE1P78406 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAE1P78406 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAE1P78406 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAE1P78406 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAE1P78406 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAE1P78406 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RAE1P78406 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.19■□□□□ 0.02
RAE1P78406 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAE1P78406 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RAE1P78406 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms