Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.95■□□□□ 0.46
ASIC1P78348 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.95■□□□□ 0.46
ASIC1P78348 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.95■□□□□ 0.46
ASIC1P78348 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.95■□□□□ 0.46
ASIC1P78348 HYMAI-201ENST00000635591 3347 ntBASIC17.95■□□□□ 0.46
ASIC1P78348 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 AC011477.6-201ENST00000604980 1927 ntBASIC17.95■□□□□ 0.46
ASIC1P78348 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.95■□□□□ 0.46
ASIC1P78348 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.95■□□□□ 0.46
ASIC1P78348 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ASIC1P78348 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.95■□□□□ 0.46
ASIC1P78348 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ASIC1P78348 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ASIC1P78348 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ASIC1P78348 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.94■□□□□ 0.46
ASIC1P78348 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.94■□□□□ 0.46
ASIC1P78348 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.94■□□□□ 0.46
ASIC1P78348 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ASIC1P78348 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ASIC1P78348 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.94■□□□□ 0.46
ASIC1P78348 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.94■□□□□ 0.46
ASIC1P78348 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.94■□□□□ 0.46
ASIC1P78348 MIR3687-2-201ENST00000577708 61 ntBASIC17.94■□□□□ 0.46
ASIC1P78348 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.94■□□□□ 0.46
ASIC1P78348 MIR3687-1-201ENST00000614492 61 ntBASIC17.94■□□□□ 0.46
ASIC1P78348 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ASIC1P78348 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ASIC1P78348 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.94■□□□□ 0.46
ASIC1P78348 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ASIC1P78348 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
ASIC1P78348 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ASIC1P78348 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ASIC1P78348 TSPY26P-202ENST00000565928 3884 ntBASIC17.94■□□□□ 0.46
ASIC1P78348 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ASIC1P78348 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.93■□□□□ 0.46
ASIC1P78348 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.93■□□□□ 0.46
ASIC1P78348 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.93■□□□□ 0.46
ASIC1P78348 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ASIC1P78348 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 AC243562.2-201ENST00000561247 970 ntBASIC17.93■□□□□ 0.46
ASIC1P78348 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.93■□□□□ 0.46
ASIC1P78348 AL513210.1-201ENST00000629608 234 ntBASIC17.93■□□□□ 0.46
ASIC1P78348 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.93■□□□□ 0.46
ASIC1P78348 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.93■□□□□ 0.46
ASIC1P78348 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ASIC1P78348 AL139384.1-201ENST00000612143 3047 ntBASIC17.93■□□□□ 0.46
ASIC1P78348 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ASIC1P78348 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.93■□□□□ 0.46
ASIC1P78348 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms