Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.86■□□□□ 0.13
SRP54P61011 SDHAP3-202ENST00000515467 728 ntBASIC15.86■□□□□ 0.13
SRP54P61011 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.86■□□□□ 0.13
SRP54P61011 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.86■□□□□ 0.13
SRP54P61011 AC005225.4-201ENST00000557330 545 ntBASIC15.86■□□□□ 0.13
SRP54P61011 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.86■□□□□ 0.13
SRP54P61011 SPDYE22P-201ENST00000582158 798 ntBASIC15.86■□□□□ 0.13
SRP54P61011 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 AC012645.4-201ENST00000610691 1061 ntBASIC15.86■□□□□ 0.13
SRP54P61011 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.86■□□□□ 0.13
SRP54P61011 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SRP54P61011 CYP4F24P-201ENST00000586049 1580 ntBASIC15.86■□□□□ 0.13
SRP54P61011 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SRP54P61011 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SRP54P61011 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.86■□□□□ 0.13
SRP54P61011 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.86■□□□□ 0.13
SRP54P61011 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.85■□□□□ 0.13
SRP54P61011 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 AL118508.1-201ENST00000613502 2345 ntBASIC15.85■□□□□ 0.13
SRP54P61011 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 AC007541.1-201ENST00000570282 1469 ntBASIC15.85■□□□□ 0.13
SRP54P61011 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.85■□□□□ 0.13
SRP54P61011 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.85■□□□□ 0.13
SRP54P61011 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SRP54P61011 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
SRP54P61011 AC005034.1-201ENST00000426657 489 ntBASIC15.85■□□□□ 0.13
SRP54P61011 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SRP54P61011 AP005018.1-201ENST00000525475 301 ntBASIC15.85■□□□□ 0.13
SRP54P61011 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.85■□□□□ 0.13
SRP54P61011 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.85■□□□□ 0.13
SRP54P61011 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.85■□□□□ 0.13
SRP54P61011 AC104794.3-201ENST00000566840 1248 ntBASIC15.85■□□□□ 0.13
SRP54P61011 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.85■□□□□ 0.13
SRP54P61011 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.85■□□□□ 0.13
SRP54P61011 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.85■□□□□ 0.13
SRP54P61011 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SRP54P61011 ALOX12P2-203ENST00000570921 1945 ntBASIC15.85■□□□□ 0.13
SRP54P61011 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SRP54P61011 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.85■□□□□ 0.13
SRP54P61011 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.85■□□□□ 0.13
SRP54P61011 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SRP54P61011 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SRP54P61011 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 AC005052.1-201ENST00000625181 2492 ntBASIC15.85■□□□□ 0.13
SRP54P61011 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SRP54P61011 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SRP54P61011 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 AC068587.6-202ENST00000641839 5619 ntBASIC15.84■□□□□ 0.13
SRP54P61011 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.84■□□□□ 0.13
SRP54P61011 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SRP54P61011 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 AC114501.2-201ENST00000439631 535 ntBASIC15.84■□□□□ 0.13
SRP54P61011 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 GNAQP1-201ENST00000444815 1067 ntBASIC15.84■□□□□ 0.13
SRP54P61011 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms