Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 AC069224.1-201ENST00000566372 1715 ntBASIC14.34□□□□□ -0.11
GFRA1P56159 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GFRA1P56159 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.34□□□□□ -0.11
GFRA1P56159 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
GFRA1P56159 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GFRA1P56159 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GFRA1P56159 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
GFRA1P56159 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
GFRA1P56159 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GFRA1P56159 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GFRA1P56159 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.33□□□□□ -0.12
GFRA1P56159 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 AC136604.1-201ENST00000418535 575 ntBASIC14.33□□□□□ -0.12
GFRA1P56159 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.33□□□□□ -0.12
GFRA1P56159 TARDBPP1-201ENST00000442013 1203 ntBASIC14.33□□□□□ -0.12
GFRA1P56159 GNAQP1-201ENST00000444815 1067 ntBASIC14.33□□□□□ -0.12
GFRA1P56159 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.33□□□□□ -0.12
GFRA1P56159 HNRNPUP1-201ENST00000554987 333 ntBASIC14.33□□□□□ -0.12
GFRA1P56159 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.33□□□□□ -0.12
GFRA1P56159 SPDYE22P-201ENST00000582158 798 ntBASIC14.33□□□□□ -0.12
GFRA1P56159 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GFRA1P56159 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GFRA1P56159 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
GFRA1P56159 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 FER1L4-210ENST00000615531 5998 ntBASIC14.32□□□□□ -0.12
GFRA1P56159 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GFRA1P56159 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
GFRA1P56159 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 SPDYE19P-201ENST00000338590 713 ntBASIC14.32□□□□□ -0.12
GFRA1P56159 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 AC074338.1-201ENST00000416825 156 ntBASIC14.32□□□□□ -0.12
GFRA1P56159 DFFBP1-201ENST00000433250 979 ntBASIC14.32□□□□□ -0.12
GFRA1P56159 RPL13P2-201ENST00000440687 659 ntBASIC14.32□□□□□ -0.12
GFRA1P56159 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.32□□□□□ -0.12
GFRA1P56159 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 AC093004.1-201ENST00000508850 424 ntBASIC14.32□□□□□ -0.12
GFRA1P56159 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.32□□□□□ -0.12
GFRA1P56159 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.32□□□□□ -0.12
GFRA1P56159 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.32□□□□□ -0.12
GFRA1P56159 AL132655.2-201ENST00000596276 594 ntBASIC14.32□□□□□ -0.12
GFRA1P56159 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.32□□□□□ -0.12
GFRA1P56159 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.32□□□□□ -0.12
GFRA1P56159 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GFRA1P56159 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms