Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CENPAP49450 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.66□□□□□ -0.06
CENPAP49450 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.66□□□□□ -0.06
CENPAP49450 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.66□□□□□ -0.06
CENPAP49450 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
CENPAP49450 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CENPAP49450 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 AP001005.1-201ENST00000571755 1248 ntBASIC14.66□□□□□ -0.06
CENPAP49450 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.66□□□□□ -0.06
CENPAP49450 AL031055.1-201ENST00000606362 631 ntBASIC14.66□□□□□ -0.06
CENPAP49450 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 AL645728.2-201ENST00000641974 660 ntBASIC14.66□□□□□ -0.06
CENPAP49450 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CENPAP49450 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CENPAP49450 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CENPAP49450 AC104581.4-201ENST00000623126 3052 ntBASIC14.66□□□□□ -0.06
CENPAP49450 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.66□□□□□ -0.06
CENPAP49450 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CENPAP49450 HMGA1P7-201ENST00000406908 502 ntBASIC14.65□□□□□ -0.06
CENPAP49450 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 PRSS29P-201ENST00000440800 595 ntBASIC14.65□□□□□ -0.06
CENPAP49450 VN2R19P-201ENST00000442399 1052 ntBASIC14.65□□□□□ -0.06
CENPAP49450 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.65□□□□□ -0.06
CENPAP49450 UNC93B6-202ENST00000528242 690 ntBASIC14.65□□□□□ -0.06
CENPAP49450 AL160237.2-201ENST00000556165 472 ntBASIC14.65□□□□□ -0.06
CENPAP49450 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.65□□□□□ -0.06
CENPAP49450 AL031432.2-201ENST00000566714 459 ntBASIC14.65□□□□□ -0.06
CENPAP49450 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 AL928711.1-201ENST00000570165 459 ntBASIC14.65□□□□□ -0.06
CENPAP49450 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 MIR7706-201ENST00000613747 67 ntBASIC14.65□□□□□ -0.06
CENPAP49450 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.65□□□□□ -0.06
CENPAP49450 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.65□□□□□ -0.06
CENPAP49450 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CENPAP49450 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.65□□□□□ -0.06
CENPAP49450 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.65□□□□□ -0.06
CENPAP49450 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CENPAP49450 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms