Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.3□□□□□ -0.28
SNCAP37840 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 AP001350.2-201ENST00000625104 1094 ntBASIC13.3□□□□□ -0.28
SNCAP37840 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
SNCAP37840 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 KRT8P39-201ENST00000396270 1433 ntBASIC13.3□□□□□ -0.28
SNCAP37840 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SNCAP37840 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNCAP37840 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SNCAP37840 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNCAP37840 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.29□□□□□ -0.28
SNCAP37840 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 LINC01711-201ENST00000598340 967 ntBASIC13.29□□□□□ -0.28
SNCAP37840 AL121772.3-201ENST00000610840 674 ntBASIC13.29□□□□□ -0.28
SNCAP37840 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 AC131009.4-201ENST00000624048 1740 ntBASIC13.29□□□□□ -0.28
SNCAP37840 TMBIM7P-203ENST00000641617 1718 ntBASIC13.29□□□□□ -0.28
SNCAP37840 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SNCAP37840 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNCAP37840 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.29□□□□□ -0.28
SNCAP37840 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNCAP37840 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.28□□□□□ -0.28
SNCAP37840 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.28□□□□□ -0.28
SNCAP37840 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 ARMC10P1-201ENST00000313754 855 ntBASIC13.28□□□□□ -0.28
SNCAP37840 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNCAP37840 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.28□□□□□ -0.28
SNCAP37840 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.28□□□□□ -0.28
SNCAP37840 AC026396.1-201ENST00000419388 421 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms