Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RORAP35398 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.27■□□□□ 0.03
RORAP35398 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RORAP35398 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
RORAP35398 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RORAP35398 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.27■□□□□ 0.03
RORAP35398 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RORAP35398 AC103702.1-201ENST00000548801 2630 ntBASIC15.27■□□□□ 0.03
RORAP35398 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RORAP35398 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RORAP35398 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.26■□□□□ 0.03
RORAP35398 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 AC063926.2-201ENST00000623766 1308 ntBASIC15.26■□□□□ 0.03
RORAP35398 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.26■□□□□ 0.03
RORAP35398 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.26■□□□□ 0.03
RORAP35398 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.26■□□□□ 0.03
RORAP35398 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.26■□□□□ 0.03
RORAP35398 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 AC114501.2-201ENST00000439631 535 ntBASIC15.26■□□□□ 0.03
RORAP35398 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 GAPDHP21-201ENST00000450301 1010 ntBASIC15.26■□□□□ 0.03
RORAP35398 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.26■□□□□ 0.03
RORAP35398 AC104794.3-201ENST00000566840 1248 ntBASIC15.26■□□□□ 0.03
RORAP35398 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.26■□□□□ 0.03
RORAP35398 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.26■□□□□ 0.03
RORAP35398 AC004790.1-201ENST00000612686 536 ntBASIC15.26■□□□□ 0.03
RORAP35398 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 AL358472.5-202ENST00000641448 1267 ntBASIC15.26■□□□□ 0.03
RORAP35398 AC068418.2-201ENST00000577309 3703 ntBASIC15.26■□□□□ 0.03
RORAP35398 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.26■□□□□ 0.03
RORAP35398 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.26■□□□□ 0.03
RORAP35398 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RORAP35398 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RORAP35398 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.25■□□□□ 0.03
RORAP35398 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
RORAP35398 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.25■□□□□ 0.03
RORAP35398 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.25■□□□□ 0.03
RORAP35398 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.25■□□□□ 0.03
RORAP35398 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.25■□□□□ 0.03
RORAP35398 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RORAP35398 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.25■□□□□ 0.03
RORAP35398 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.25■□□□□ 0.03
RORAP35398 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.25■□□□□ 0.03
RORAP35398 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 AL132655.2-201ENST00000596276 594 ntBASIC15.25■□□□□ 0.03
RORAP35398 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 AC005052.1-201ENST00000625181 2492 ntBASIC15.25■□□□□ 0.03
RORAP35398 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RORAP35398 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RORAP35398 AL136982.4-201ENST00000437689 1740 ntBASIC15.25■□□□□ 0.03
RORAP35398 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.25■□□□□ 0.03
RORAP35398 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RORAP35398 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RORAP35398 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RORAP35398 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RORAP35398 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RORAP35398 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RORAP35398 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms