Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.31□□□□□ -0.12
CD40LGP29965 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD40LGP29965 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.31□□□□□ -0.12
CD40LGP29965 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 AL671277.2-201ENST00000458060 996 ntBASIC14.31□□□□□ -0.12
CD40LGP29965 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.31□□□□□ -0.12
CD40LGP29965 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CD40LGP29965 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.31□□□□□ -0.12
CD40LGP29965 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CD40LGP29965 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CD40LGP29965 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
CD40LGP29965 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.31□□□□□ -0.12
CD40LGP29965 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.31□□□□□ -0.12
CD40LGP29965 AL122018.1-201ENST00000446607 2310 ntBASIC14.31□□□□□ -0.12
CD40LGP29965 CICP17-201ENST00000418553 2377 ntBASIC14.31□□□□□ -0.12
CD40LGP29965 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 AC097376.2-205ENST00000610159 5334 ntBASIC14.31□□□□□ -0.12
CD40LGP29965 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CD40LGP29965 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD40LGP29965 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.31□□□□□ -0.12
CD40LGP29965 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 PTENP1-202ENST00000532280 3996 ntBASIC14.3□□□□□ -0.12
CD40LGP29965 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40LGP29965 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 AP003733.1-201ENST00000491725 852 ntBASIC14.3□□□□□ -0.12
CD40LGP29965 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.3□□□□□ -0.12
CD40LGP29965 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.3□□□□□ -0.12
CD40LGP29965 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.3□□□□□ -0.12
CD40LGP29965 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
CD40LGP29965 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CD40LGP29965 MBLAC2-202ENST00000514906 1936 ntBASIC14.3□□□□□ -0.12
CD40LGP29965 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40LGP29965 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CD40LGP29965 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 AL592424.1-201ENST00000563624 1536 ntBASIC14.3□□□□□ -0.12
CD40LGP29965 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD40LGP29965 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD40LGP29965 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD40LGP29965 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CD40LGP29965 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40LGP29965 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms