Protein–RNA interactions for Protein: P29373

CRABP2, Cellular retinoic acid-binding protein 2, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP2P29373 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.05■□□□□ 0.16
CRABP2P29373 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.05■□□□□ 0.16
CRABP2P29373 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.05■□□□□ 0.16
CRABP2P29373 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.05■□□□□ 0.16
CRABP2P29373 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.05■□□□□ 0.16
CRABP2P29373 KRT126P-201ENST00000549467 1181 ntBASIC16.05■□□□□ 0.16
CRABP2P29373 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.05■□□□□ 0.16
CRABP2P29373 KRT19P2-202ENST00000557173 1012 ntBASIC16.05■□□□□ 0.16
CRABP2P29373 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.05■□□□□ 0.16
CRABP2P29373 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.05■□□□□ 0.16
CRABP2P29373 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CRABP2P29373 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRABP2P29373 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.05■□□□□ 0.16
CRABP2P29373 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.04■□□□□ 0.16
CRABP2P29373 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.04■□□□□ 0.16
CRABP2P29373 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 AC020658.6-201ENST00000623564 1870 ntBASIC16.04■□□□□ 0.16
CRABP2P29373 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.04■□□□□ 0.16
CRABP2P29373 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.04■□□□□ 0.16
CRABP2P29373 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.04■□□□□ 0.16
CRABP2P29373 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.04■□□□□ 0.16
CRABP2P29373 AC145285.3-201ENST00000564603 959 ntBASIC16.04■□□□□ 0.16
CRABP2P29373 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CRABP2P29373 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CRABP2P29373 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
CRABP2P29373 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CRABP2P29373 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.04■□□□□ 0.16
CRABP2P29373 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.04■□□□□ 0.16
CRABP2P29373 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CRABP2P29373 NORAD-201ENST00000565493 5339 ntBASIC16.04■□□□□ 0.16
CRABP2P29373 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.03■□□□□ 0.16
CRABP2P29373 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.03■□□□□ 0.16
CRABP2P29373 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.03■□□□□ 0.16
CRABP2P29373 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.03■□□□□ 0.16
CRABP2P29373 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.03■□□□□ 0.16
CRABP2P29373 HLA-A-201ENST00000376802 1334 ntBASIC16.03■□□□□ 0.16
CRABP2P29373 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.03■□□□□ 0.16
CRABP2P29373 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CRABP2P29373 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CRABP2P29373 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.03■□□□□ 0.16
CRABP2P29373 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms