Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 MIR6069-201ENST00000620069 79 ntBASIC14.34□□□□□ -0.11
CTSSP25774 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 AC004840.1-201ENST00000636359 365 ntBASIC14.34□□□□□ -0.11
CTSSP25774 AL033527.5-202ENST00000641632 1098 ntBASIC14.34□□□□□ -0.11
CTSSP25774 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CTSSP25774 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.34□□□□□ -0.11
CTSSP25774 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSSP25774 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CTSSP25774 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CTSSP25774 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CTSSP25774 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTSSP25774 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSSP25774 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSSP25774 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSSP25774 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSSP25774 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTSSP25774 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 AC007541.1-201ENST00000570282 1469 ntBASIC14.33□□□□□ -0.12
CTSSP25774 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 LINC02199-201ENST00000506655 2702 ntBASIC14.33□□□□□ -0.12
CTSSP25774 FER1L4-210ENST00000615531 5998 ntBASIC14.33□□□□□ -0.12
CTSSP25774 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
CTSSP25774 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 AL512361.1-201ENST00000554200 418 ntBASIC14.33□□□□□ -0.12
CTSSP25774 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.33□□□□□ -0.12
CTSSP25774 MIR4321-201ENST00000592276 80 ntBASIC14.33□□□□□ -0.12
CTSSP25774 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.33□□□□□ -0.12
CTSSP25774 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CTSSP25774 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSSP25774 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CTSSP25774 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSSP25774 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CTSSP25774 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSSP25774 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSSP25774 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSSP25774 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CTSSP25774 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSSP25774 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSSP25774 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSSP25774 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTSSP25774 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CTSSP25774 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms