Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL590560.3-201ENST00000623350 461 ntBASIC16.22■□□□□ 0.19
XPAP23025 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.22■□□□□ 0.19
XPAP23025 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
XPAP23025 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
XPAP23025 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
XPAP23025 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.22■□□□□ 0.19
XPAP23025 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.22■□□□□ 0.19
XPAP23025 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
XPAP23025 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.22■□□□□ 0.19
XPAP23025 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.22■□□□□ 0.19
XPAP23025 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.22■□□□□ 0.19
XPAP23025 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
XPAP23025 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.22■□□□□ 0.19
XPAP23025 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
XPAP23025 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
XPAP23025 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
XPAP23025 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
XPAP23025 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
XPAP23025 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 RPL37AP1-201ENST00000412502 279 ntBASIC16.21■□□□□ 0.19
XPAP23025 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.21■□□□□ 0.19
XPAP23025 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.21■□□□□ 0.19
XPAP23025 AC243562.2-201ENST00000561247 970 ntBASIC16.21■□□□□ 0.19
XPAP23025 TEX28P1-201ENST00000613479 1221 ntBASIC16.21■□□□□ 0.19
XPAP23025 TEX28P2-201ENST00000617764 1221 ntBASIC16.21■□□□□ 0.19
XPAP23025 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.21■□□□□ 0.19
XPAP23025 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.21■□□□□ 0.19
XPAP23025 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.21■□□□□ 0.19
XPAP23025 AC084018.2-201ENST00000613093 2607 ntBASIC16.21■□□□□ 0.19
XPAP23025 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.21■□□□□ 0.19
XPAP23025 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
XPAP23025 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
XPAP23025 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
XPAP23025 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
XPAP23025 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.2■□□□□ 0.18
XPAP23025 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.2■□□□□ 0.18
XPAP23025 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.2■□□□□ 0.18
XPAP23025 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.2■□□□□ 0.18
XPAP23025 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
XPAP23025 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.2■□□□□ 0.18
XPAP23025 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.2■□□□□ 0.18
XPAP23025 RN7SL618P-201ENST00000477850 296 ntBASIC16.2■□□□□ 0.18
XPAP23025 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.2■□□□□ 0.18
XPAP23025 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.2■□□□□ 0.18
XPAP23025 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
XPAP23025 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
XPAP23025 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 AL662844.4-201ENST00000606367 2838 ntBASIC16.2■□□□□ 0.18
XPAP23025 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.2■□□□□ 0.18
XPAP23025 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
XPAP23025 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.2■□□□□ 0.18
XPAP23025 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
XPAP23025 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.19■□□□□ 0.18
XPAP23025 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms