Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AOC4P-203ENST00000566825 2289 ntBASIC12.39□□□□□ -0.43
RAB4AP20338 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 MIR1238-201ENST00000408483 83 ntBASIC12.39□□□□□ -0.43
RAB4AP20338 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.39□□□□□ -0.43
RAB4AP20338 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.39□□□□□ -0.43
RAB4AP20338 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.39□□□□□ -0.43
RAB4AP20338 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 AC232323.1-201ENST00000540724 2099 ntBASIC12.39□□□□□ -0.43
RAB4AP20338 REXO1L5P-201ENST00000622260 2098 ntBASIC12.39□□□□□ -0.43
RAB4AP20338 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 Z82170.1-201ENST00000625081 3192 ntBASIC12.38□□□□□ -0.43
RAB4AP20338 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
RAB4AP20338 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.38□□□□□ -0.43
RAB4AP20338 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.38□□□□□ -0.43
RAB4AP20338 HLA-J-202ENST00000469281 1241 ntBASIC12.38□□□□□ -0.43
RAB4AP20338 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.38□□□□□ -0.43
RAB4AP20338 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 AL136038.4-201ENST00000603606 1261 ntBASIC12.38□□□□□ -0.43
RAB4AP20338 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 AC002310.6-201ENST00000624451 1377 ntBASIC12.38□□□□□ -0.43
RAB4AP20338 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB4AP20338 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB4AP20338 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RAB4AP20338 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms