Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC3P19447 AC011495.1-201ENST00000498085 584 ntBASIC18.6■□□□□ 0.57
ERCC3P19447 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 TPRX2P-201ENST00000535362 881 ntBASIC18.6■□□□□ 0.57
ERCC3P19447 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 AC023310.3-201ENST00000557027 670 ntBASIC18.6■□□□□ 0.57
ERCC3P19447 AC100756.1-201ENST00000562736 682 ntBASIC18.6■□□□□ 0.57
ERCC3P19447 AC138749.3-201ENST00000567691 622 ntBASIC18.6■□□□□ 0.57
ERCC3P19447 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.6■□□□□ 0.57
ERCC3P19447 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.6■□□□□ 0.57
ERCC3P19447 AC116165.1-201ENST00000611806 668 ntBASIC18.6■□□□□ 0.57
ERCC3P19447 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC3P19447 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC3P19447 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC3P19447 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ERCC3P19447 AC006538.1-201ENST00000567905 1585 ntBASIC18.59■□□□□ 0.57
ERCC3P19447 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
ERCC3P19447 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
ERCC3P19447 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.59■□□□□ 0.57
ERCC3P19447 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ERCC3P19447 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.59■□□□□ 0.57
ERCC3P19447 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.59■□□□□ 0.57
ERCC3P19447 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 AL596257.1-201ENST00000641463 2694 ntBASIC18.59■□□□□ 0.57
ERCC3P19447 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC3P19447 AC005052.1-201ENST00000625181 2492 ntBASIC18.59■□□□□ 0.57
ERCC3P19447 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ERCC3P19447 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC3P19447 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.58■□□□□ 0.57
ERCC3P19447 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC3P19447 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
ERCC3P19447 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC3P19447 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ERCC3P19447 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ERCC3P19447 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC3P19447 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC3P19447 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.58■□□□□ 0.57
ERCC3P19447 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC3P19447 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.58■□□□□ 0.56
ERCC3P19447 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.58■□□□□ 0.56
ERCC3P19447 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ERCC3P19447 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.58■□□□□ 0.56
ERCC3P19447 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC3P19447 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ERCC3P19447 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ERCC3P19447 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ERCC3P19447 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
ERCC3P19447 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms