Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PRYP6-201ENST00000514804 343 ntBASIC16.23■□□□□ 0.19
VCLP18206 AC105233.2-201ENST00000523697 349 ntBASIC16.23■□□□□ 0.19
VCLP18206 AF228730.5-201ENST00000530288 346 ntBASIC16.23■□□□□ 0.19
VCLP18206 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.23■□□□□ 0.19
VCLP18206 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.23■□□□□ 0.19
VCLP18206 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.23■□□□□ 0.19
VCLP18206 AC027307.2-201ENST00000591252 911 ntBASIC16.23■□□□□ 0.19
VCLP18206 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.23■□□□□ 0.19
VCLP18206 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.23■□□□□ 0.19
VCLP18206 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.23■□□□□ 0.19
VCLP18206 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.23■□□□□ 0.19
VCLP18206 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.23■□□□□ 0.19
VCLP18206 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.22■□□□□ 0.19
VCLP18206 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 POU5F1P6-201ENST00000466990 990 ntBASIC16.22■□□□□ 0.19
VCLP18206 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.22■□□□□ 0.19
VCLP18206 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.22■□□□□ 0.19
VCLP18206 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.22■□□□□ 0.19
VCLP18206 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.22■□□□□ 0.19
VCLP18206 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
VCLP18206 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCLP18206 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.22■□□□□ 0.19
VCLP18206 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.22■□□□□ 0.19
VCLP18206 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.22■□□□□ 0.19
VCLP18206 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.21■□□□□ 0.19
VCLP18206 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.21■□□□□ 0.19
VCLP18206 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.21■□□□□ 0.19
VCLP18206 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.21■□□□□ 0.19
VCLP18206 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VCLP18206 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.21■□□□□ 0.19
VCLP18206 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VCLP18206 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VCLP18206 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VCLP18206 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms