Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RN7SL399P-201ENST00000471648 279 ntBASIC18.42■□□□□ 0.54
BMP3P12645 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 AC104596.2-201ENST00000512793 793 ntBASIC18.42■□□□□ 0.54
BMP3P12645 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.42■□□□□ 0.54
BMP3P12645 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 AC132938.2-201ENST00000579188 680 ntBASIC18.42■□□□□ 0.54
BMP3P12645 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.42■□□□□ 0.54
BMP3P12645 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.42■□□□□ 0.54
BMP3P12645 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 AL591163.1-201ENST00000641757 987 ntBASIC18.42■□□□□ 0.54
BMP3P12645 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
BMP3P12645 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.42■□□□□ 0.54
BMP3P12645 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.42■□□□□ 0.54
BMP3P12645 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.42■□□□□ 0.54
BMP3P12645 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
BMP3P12645 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP3P12645 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.41■□□□□ 0.54
BMP3P12645 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.41■□□□□ 0.54
BMP3P12645 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BMP3P12645 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
BMP3P12645 AC244107.1-201ENST00000442033 332 ntBASIC18.41■□□□□ 0.54
BMP3P12645 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.41■□□□□ 0.54
BMP3P12645 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 GIMAP3P-201ENST00000495150 836 ntBASIC18.41■□□□□ 0.54
BMP3P12645 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP3P12645 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.41■□□□□ 0.54
BMP3P12645 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP3P12645 AC097359.3-201ENST00000603982 1210 ntBASIC18.41■□□□□ 0.54
BMP3P12645 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
BMP3P12645 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
BMP3P12645 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP3P12645 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP3P12645 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
BMP3P12645 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
BMP3P12645 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 MTHFR-217ENST00000641820 1569 ntBASIC18.41■□□□□ 0.54
BMP3P12645 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
BMP3P12645 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
BMP3P12645 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
BMP3P12645 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP3P12645 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 CDC14C-201ENST00000428251 1719 ntBASIC18.4■□□□□ 0.54
BMP3P12645 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BMP3P12645 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.4■□□□□ 0.54
BMP3P12645 TOMM22P5-201ENST00000416399 439 ntBASIC18.4■□□□□ 0.54
BMP3P12645 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BMP3P12645 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BMP3P12645 AC036164.1-201ENST00000570544 333 ntBASIC18.4■□□□□ 0.54
BMP3P12645 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.4■□□□□ 0.54
BMP3P12645 WFDC1-204ENST00000613603 549 ntBASIC18.4■□□□□ 0.54
BMP3P12645 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.4■□□□□ 0.54
BMP3P12645 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BMP3P12645 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BMP3P12645 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP3P12645 AC018892.3-201ENST00000623986 2499 ntBASIC18.4■□□□□ 0.54
BMP3P12645 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP3P12645 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
BMP3P12645 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BMP3P12645 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.39■□□□□ 0.54
BMP3P12645 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
BMP3P12645 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms