Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.57□□□□□ -0.4
CD28P10747 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 LINC01144-201ENST00000626198 1710 ntBASIC12.57□□□□□ -0.4
CD28P10747 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 RNF216P1-203ENST00000404404 2427 ntBASIC12.57□□□□□ -0.4
CD28P10747 OR8S1-201ENST00000310194 1080 ntBASIC12.57□□□□□ -0.4
CD28P10747 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.57□□□□□ -0.4
CD28P10747 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 SDHAP3-202ENST00000515467 728 ntBASIC12.57□□□□□ -0.4
CD28P10747 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.57□□□□□ -0.4
CD28P10747 CHCHD2P3-201ENST00000603038 451 ntBASIC12.57□□□□□ -0.4
CD28P10747 AC008494.3-201ENST00000606615 944 ntBASIC12.57□□□□□ -0.4
CD28P10747 AL008721.1-201ENST00000609964 604 ntBASIC12.57□□□□□ -0.4
CD28P10747 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 AC004461.2-201ENST00000629517 803 ntBASIC12.57□□□□□ -0.4
CD28P10747 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.57□□□□□ -0.4
CD28P10747 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.57□□□□□ -0.4
CD28P10747 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CD28P10747 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CD28P10747 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD28P10747 AC067930.6-201ENST00000623257 4947 ntBASIC12.57□□□□□ -0.4
CD28P10747 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CD28P10747 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.56□□□□□ -0.4
CD28P10747 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.56□□□□□ -0.4
CD28P10747 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.56□□□□□ -0.4
CD28P10747 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CD28P10747 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.56□□□□□ -0.4
CD28P10747 AC114501.2-201ENST00000439631 535 ntBASIC12.56□□□□□ -0.4
CD28P10747 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.56□□□□□ -0.4
CD28P10747 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 MEIS3P1-201ENST00000495167 958 ntBASIC12.56□□□□□ -0.4
CD28P10747 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 AC093004.1-201ENST00000508850 424 ntBASIC12.56□□□□□ -0.4
CD28P10747 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.56□□□□□ -0.4
CD28P10747 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.56□□□□□ -0.4
CD28P10747 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.56□□□□□ -0.4
CD28P10747 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.56□□□□□ -0.4
CD28P10747 SRD5A3P1-201ENST00000603021 949 ntBASIC12.56□□□□□ -0.4
CD28P10747 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.56□□□□□ -0.4
CD28P10747 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 U82695.1-201ENST00000635752 1889 ntBASIC12.56□□□□□ -0.4
CD28P10747 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.56□□□□□ -0.4
CD28P10747 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.56□□□□□ -0.4
CD28P10747 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
CD28P10747 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD28P10747 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
CD28P10747 AL391825.1-201ENST00000457671 1364 ntBASIC12.56□□□□□ -0.4
CD28P10747 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms