Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.09■□□□□ 0.49
TPM3P06753 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.09■□□□□ 0.49
TPM3P06753 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.09■□□□□ 0.49
TPM3P06753 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.09■□□□□ 0.49
TPM3P06753 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 AL049597.2-201ENST00000565575 961 ntBASIC18.09■□□□□ 0.49
TPM3P06753 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.09■□□□□ 0.49
TPM3P06753 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.09■□□□□ 0.49
TPM3P06753 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 AC232323.1-201ENST00000540724 2099 ntBASIC18.09■□□□□ 0.49
TPM3P06753 REXO1L5P-201ENST00000622260 2098 ntBASIC18.09■□□□□ 0.49
TPM3P06753 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 AC008677.1-201ENST00000519230 1561 ntBASIC18.08■□□□□ 0.49
TPM3P06753 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.08■□□□□ 0.49
TPM3P06753 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TPM3P06753 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPM3P06753 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.08■□□□□ 0.49
TPM3P06753 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM3P06753 ARMC10P1-201ENST00000313754 855 ntBASIC18.08■□□□□ 0.48
TPM3P06753 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM3P06753 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TPM3P06753 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM3P06753 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM3P06753 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM3P06753 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM3P06753 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM3P06753 AC069148.1-201ENST00000608741 768 ntBASIC18.08■□□□□ 0.48
TPM3P06753 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.08■□□□□ 0.48
TPM3P06753 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.08■□□□□ 0.48
TPM3P06753 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.08■□□□□ 0.48
TPM3P06753 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM3P06753 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM3P06753 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM3P06753 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TPM3P06753 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TPM3P06753 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
TPM3P06753 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM3P06753 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.07■□□□□ 0.48
TPM3P06753 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 AC107918.2-201ENST00000530817 355 ntBASIC18.07■□□□□ 0.48
TPM3P06753 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.07■□□□□ 0.48
TPM3P06753 MTDHP3-201ENST00000594186 672 ntBASIC18.07■□□□□ 0.48
TPM3P06753 NPAP1P7-201ENST00000613027 823 ntBASIC18.07■□□□□ 0.48
TPM3P06753 GGTLC5P-201ENST00000617623 998 ntBASIC18.07■□□□□ 0.48
TPM3P06753 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TPM3P06753 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM3P06753 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms