Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.7■□□□□ 0.9
COL5A2P05997 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.7■□□□□ 0.9
COL5A2P05997 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.7■□□□□ 0.9
COL5A2P05997 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.7■□□□□ 0.9
COL5A2P05997 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
COL5A2P05997 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.7■□□□□ 0.9
COL5A2P05997 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL5A2P05997 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL5A2P05997 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 AC148477.4-201ENST00000613430 1793 ntBASIC20.7■□□□□ 0.9
COL5A2P05997 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL5A2P05997 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.69■□□□□ 0.9
COL5A2P05997 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.69■□□□□ 0.9
COL5A2P05997 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
COL5A2P05997 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 AC079178.1-201ENST00000420915 656 ntBASIC20.69■□□□□ 0.9
COL5A2P05997 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.69■□□□□ 0.9
COL5A2P05997 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
COL5A2P05997 AC126915.1-201ENST00000522847 1038 ntBASIC20.69■□□□□ 0.9
COL5A2P05997 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.69■□□□□ 0.9
COL5A2P05997 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COL5A2P05997 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.69■□□□□ 0.9
COL5A2P05997 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.69■□□□□ 0.9
COL5A2P05997 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC20.69■□□□□ 0.9
COL5A2P05997 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
COL5A2P05997 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.69■□□□□ 0.9
COL5A2P05997 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.69■□□□□ 0.9
COL5A2P05997 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.69■□□□□ 0.9
COL5A2P05997 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.69■□□□□ 0.9
COL5A2P05997 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.69■□□□□ 0.9
COL5A2P05997 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL5A2P05997 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
COL5A2P05997 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
COL5A2P05997 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COL5A2P05997 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL5A2P05997 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.68■□□□□ 0.9
COL5A2P05997 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL5A2P05997 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.68■□□□□ 0.9
COL5A2P05997 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL5A2P05997 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL5A2P05997 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL5A2P05997 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL5A2P05997 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
COL5A2P05997 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.68■□□□□ 0.9
COL5A2P05997 RN7SL769P-201ENST00000469386 295 ntBASIC20.68■□□□□ 0.9
COL5A2P05997 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.68■□□□□ 0.9
COL5A2P05997 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.68■□□□□ 0.9
COL5A2P05997 AC138649.2-201ENST00000615886 705 ntBASIC20.68■□□□□ 0.9
COL5A2P05997 AP001505.2-201ENST00000616815 443 ntBASIC20.68■□□□□ 0.9
COL5A2P05997 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.68■□□□□ 0.9
COL5A2P05997 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL5A2P05997 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.68■□□□□ 0.9
COL5A2P05997 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL5A2P05997 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
COL5A2P05997 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.67■□□□□ 0.9
COL5A2P05997 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL5A2P05997 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.67■□□□□ 0.9
COL5A2P05997 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 RPS2P36-201ENST00000456516 831 ntBASIC20.67■□□□□ 0.9
COL5A2P05997 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.67■□□□□ 0.9
COL5A2P05997 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.67■□□□□ 0.9
COL5A2P05997 TMEM198B-204ENST00000484016 896 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms