Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IFNB1P01574 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.69■□□□□ 0.26
IFNB1P01574 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.69■□□□□ 0.26
IFNB1P01574 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.69■□□□□ 0.26
IFNB1P01574 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.69■□□□□ 0.26
IFNB1P01574 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.69■□□□□ 0.26
IFNB1P01574 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.69■□□□□ 0.26
IFNB1P01574 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.69■□□□□ 0.26
IFNB1P01574 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.69■□□□□ 0.26
IFNB1P01574 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.69■□□□□ 0.26
IFNB1P01574 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.69■□□□□ 0.26
IFNB1P01574 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.69■□□□□ 0.26
IFNB1P01574 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNB1P01574 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.69■□□□□ 0.26
IFNB1P01574 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.68■□□□□ 0.26
IFNB1P01574 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.68■□□□□ 0.26
IFNB1P01574 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IFNB1P01574 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.68■□□□□ 0.26
IFNB1P01574 AC013268.4-201ENST00000637413 2228 ntBASIC16.68■□□□□ 0.26
IFNB1P01574 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.68■□□□□ 0.26
IFNB1P01574 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.68■□□□□ 0.26
IFNB1P01574 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
IFNB1P01574 AC007967.2-201ENST00000432613 625 ntBASIC16.68■□□□□ 0.26
IFNB1P01574 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.68■□□□□ 0.26
IFNB1P01574 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
IFNB1P01574 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.68■□□□□ 0.26
IFNB1P01574 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.68■□□□□ 0.26
IFNB1P01574 KRT19P2-202ENST00000557173 1012 ntBASIC16.68■□□□□ 0.26
IFNB1P01574 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.68■□□□□ 0.26
IFNB1P01574 AL365330.1-201ENST00000607459 531 ntBASIC16.68■□□□□ 0.26
IFNB1P01574 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.68■□□□□ 0.26
IFNB1P01574 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IFNB1P01574 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.68■□□□□ 0.26
IFNB1P01574 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 PCDHA3-202ENST00000532566 4594 ntBASIC16.68■□□□□ 0.26
IFNB1P01574 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.68■□□□□ 0.26
IFNB1P01574 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFNB1P01574 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
IFNB1P01574 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.67■□□□□ 0.26
IFNB1P01574 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNB1P01574 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 TPM4P1-201ENST00000436100 807 ntBASIC16.67■□□□□ 0.26
IFNB1P01574 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IFNB1P01574 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNB1P01574 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNB1P01574 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
IFNB1P01574 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNB1P01574 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
IFNB1P01574 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.67■□□□□ 0.26
IFNB1P01574 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.67■□□□□ 0.26
IFNB1P01574 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
IFNB1P01574 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFNB1P01574 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
IFNB1P01574 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.66■□□□□ 0.26
IFNB1P01574 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms