Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD4O95243 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD4O95243 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MBD4O95243 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.08■□□□□ 0.65
MBD4O95243 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 AC011477.6-201ENST00000604980 1927 ntBASIC19.08■□□□□ 0.65
MBD4O95243 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.08■□□□□ 0.65
MBD4O95243 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MBD4O95243 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.08■□□□□ 0.65
MBD4O95243 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.08■□□□□ 0.65
MBD4O95243 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD4O95243 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 SPDYE19P-201ENST00000338590 713 ntBASIC19.08■□□□□ 0.64
MBD4O95243 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.08■□□□□ 0.64
MBD4O95243 DOC2GP-202ENST00000514950 1163 ntBASIC19.08■□□□□ 0.64
MBD4O95243 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.08■□□□□ 0.64
MBD4O95243 AL603832.2-201ENST00000566195 2125 ntBASIC19.08■□□□□ 0.64
MBD4O95243 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.08■□□□□ 0.64
MBD4O95243 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD4O95243 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.07■□□□□ 0.64
MBD4O95243 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 AC018695.7-201ENST00000624587 2492 ntBASIC19.07■□□□□ 0.64
MBD4O95243 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD4O95243 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD4O95243 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD4O95243 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD4O95243 AC190387.1-201ENST00000551683 408 ntBASIC19.07■□□□□ 0.64
MBD4O95243 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
MBD4O95243 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 AL132655.2-201ENST00000596276 594 ntBASIC19.07■□□□□ 0.64
MBD4O95243 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD4O95243 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 CROCCP1-201ENST00000426910 5675 ntBASIC19.07■□□□□ 0.64
MBD4O95243 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MBD4O95243 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD4O95243 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD4O95243 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
MBD4O95243 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.06■□□□□ 0.64
MBD4O95243 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.06■□□□□ 0.64
MBD4O95243 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MBD4O95243 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 AC010491.1-201ENST00000563101 2797 ntBASIC19.06■□□□□ 0.64
MBD4O95243 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.06■□□□□ 0.64
MBD4O95243 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
MBD4O95243 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.06■□□□□ 0.64
MBD4O95243 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.06■□□□□ 0.64
MBD4O95243 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.06■□□□□ 0.64
MBD4O95243 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.06■□□□□ 0.64
MBD4O95243 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.06■□□□□ 0.64
MBD4O95243 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
MBD4O95243 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MBD4O95243 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MBD4O95243 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
MBD4O95243 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms