Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF253O75346 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 PTCHD3P3-201ENST00000403073 906 ntBASIC12.6□□□□□ -0.39
ZNF253O75346 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF253O75346 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF253O75346 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.6□□□□□ -0.39
ZNF253O75346 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 MTDHP3-201ENST00000594186 672 ntBASIC12.6□□□□□ -0.39
ZNF253O75346 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.6□□□□□ -0.39
ZNF253O75346 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF253O75346 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF253O75346 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZNF253O75346 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF253O75346 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.6□□□□□ -0.39
ZNF253O75346 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZNF253O75346 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF253O75346 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.6□□□□□ -0.39
ZNF253O75346 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF253O75346 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF253O75346 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 SLC22A20-204ENST00000530038 1673 ntBASIC12.59□□□□□ -0.39
ZNF253O75346 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF253O75346 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF253O75346 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.59□□□□□ -0.39
ZNF253O75346 LAGE3P1-201ENST00000425356 484 ntBASIC12.59□□□□□ -0.39
ZNF253O75346 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
ZNF253O75346 MTDHP4-201ENST00000600287 670 ntBASIC12.59□□□□□ -0.39
ZNF253O75346 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.59□□□□□ -0.39
ZNF253O75346 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF253O75346 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF253O75346 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF253O75346 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF253O75346 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF253O75346 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF253O75346 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.58□□□□□ -0.39
ZNF253O75346 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 292.1 ms