Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.86■□□□□ 0.29
OPHN1O60890 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
OPHN1O60890 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
OPHN1O60890 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
OPHN1O60890 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
OPHN1O60890 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
OPHN1O60890 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
OPHN1O60890 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
OPHN1O60890 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
OPHN1O60890 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
OPHN1O60890 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
OPHN1O60890 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.85■□□□□ 0.29
OPHN1O60890 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
OPHN1O60890 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
OPHN1O60890 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.85■□□□□ 0.29
OPHN1O60890 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.85■□□□□ 0.29
OPHN1O60890 AC055876.3-201ENST00000431496 288 ntBASIC16.85■□□□□ 0.29
OPHN1O60890 AL592309.1-201ENST00000443127 649 ntBASIC16.85■□□□□ 0.29
OPHN1O60890 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.85■□□□□ 0.29
OPHN1O60890 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 AC138649.4-201ENST00000612222 287 ntBASIC16.85■□□□□ 0.29
OPHN1O60890 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.85■□□□□ 0.29
OPHN1O60890 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.85■□□□□ 0.29
OPHN1O60890 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 AC023824.1-201ENST00000562945 2975 ntBASIC16.85■□□□□ 0.29
OPHN1O60890 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.85■□□□□ 0.29
OPHN1O60890 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.85■□□□□ 0.29
OPHN1O60890 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.85■□□□□ 0.29
OPHN1O60890 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
OPHN1O60890 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 AC007326.2-201ENST00000624224 7579 ntBASIC16.84■□□□□ 0.29
OPHN1O60890 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.84■□□□□ 0.29
OPHN1O60890 KRT18P32-201ENST00000424695 1287 ntBASIC16.84■□□□□ 0.29
OPHN1O60890 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 RN7SL589P-201ENST00000481268 310 ntBASIC16.84■□□□□ 0.29
OPHN1O60890 AC069335.1-201ENST00000489972 472 ntBASIC16.84■□□□□ 0.29
OPHN1O60890 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.84■□□□□ 0.29
OPHN1O60890 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.84■□□□□ 0.29
OPHN1O60890 AC109635.5-201ENST00000533593 962 ntBASIC16.84■□□□□ 0.29
OPHN1O60890 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.84■□□□□ 0.29
OPHN1O60890 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.84■□□□□ 0.29
OPHN1O60890 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.84■□□□□ 0.29
OPHN1O60890 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.84■□□□□ 0.29
OPHN1O60890 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.84■□□□□ 0.29
OPHN1O60890 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.84■□□□□ 0.29
OPHN1O60890 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 AC012645.4-201ENST00000610691 1061 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms