Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 AC004967.1-201ENST00000453589 447 ntBASIC16.84■□□□□ 0.29
CREB3O43889 RNA5SP410-201ENST00000516285 106 ntBASIC16.84■□□□□ 0.29
CREB3O43889 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.84■□□□□ 0.29
CREB3O43889 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.84■□□□□ 0.29
CREB3O43889 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.84■□□□□ 0.29
CREB3O43889 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.84■□□□□ 0.29
CREB3O43889 AC004835.2-201ENST00000603762 682 ntBASIC16.84■□□□□ 0.29
CREB3O43889 AL365330.1-201ENST00000607459 531 ntBASIC16.84■□□□□ 0.29
CREB3O43889 AC068587.6-202ENST00000641839 5619 ntBASIC16.84■□□□□ 0.29
CREB3O43889 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CREB3O43889 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CREB3O43889 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.83■□□□□ 0.28
CREB3O43889 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.83■□□□□ 0.28
CREB3O43889 KRT18P32-201ENST00000424695 1287 ntBASIC16.83■□□□□ 0.28
CREB3O43889 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.83■□□□□ 0.28
CREB3O43889 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.83■□□□□ 0.28
CREB3O43889 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.83■□□□□ 0.28
CREB3O43889 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.83■□□□□ 0.28
CREB3O43889 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CREB3O43889 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CREB3O43889 AC024909.3-201ENST00000611513 2257 ntBASIC16.82■□□□□ 0.28
CREB3O43889 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.82■□□□□ 0.28
CREB3O43889 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 AL627223.1-201ENST00000416693 442 ntBASIC16.82■□□□□ 0.28
CREB3O43889 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 AC093520.2-201ENST00000561830 333 ntBASIC16.82■□□□□ 0.28
CREB3O43889 SNHG9-202ENST00000564014 471 ntBASIC16.82■□□□□ 0.28
CREB3O43889 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.82■□□□□ 0.28
CREB3O43889 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CREB3O43889 AC010491.1-201ENST00000563101 2797 ntBASIC16.82■□□□□ 0.28
CREB3O43889 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CREB3O43889 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CREB3O43889 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CREB3O43889 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CREB3O43889 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CREB3O43889 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms