Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC140658.5-201ENST00000438532 169 ntBASIC15.55■□□□□ 0.08
SLC28A2O43868 GIMAP3P-201ENST00000495150 836 ntBASIC15.55■□□□□ 0.08
SLC28A2O43868 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC28A2O43868 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC28A2O43868 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC28A2O43868 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC28A2O43868 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.55■□□□□ 0.08
SLC28A2O43868 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC28A2O43868 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SLC28A2O43868 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A2O43868 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.54■□□□□ 0.08
SLC28A2O43868 AC092580.3-201ENST00000430932 139 ntBASIC15.54■□□□□ 0.08
SLC28A2O43868 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A2O43868 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 AC092658.1-201ENST00000505836 891 ntBASIC15.54■□□□□ 0.08
SLC28A2O43868 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC28A2O43868 AC107918.2-201ENST00000530817 355 ntBASIC15.54■□□□□ 0.08
SLC28A2O43868 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A2O43868 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC28A2O43868 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A2O43868 MIR6805-201ENST00000615055 62 ntBASIC15.54■□□□□ 0.08
SLC28A2O43868 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC28A2O43868 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A2O43868 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A2O43868 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC28A2O43868 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A2O43868 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A2O43868 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SLC28A2O43868 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.53■□□□□ 0.08
SLC28A2O43868 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC28A2O43868 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 NORAD-201ENST00000565493 5339 ntBASIC15.53■□□□□ 0.08
SLC28A2O43868 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC28A2O43868 AC138969.3-201ENST00000546612 1459 ntBASIC15.53■□□□□ 0.08
SLC28A2O43868 AC138932.2-201ENST00000548268 1459 ntBASIC15.53■□□□□ 0.08
SLC28A2O43868 AC126755.4-201ENST00000549796 1459 ntBASIC15.53■□□□□ 0.08
SLC28A2O43868 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A2O43868 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 AC129492.6-201ENST00000611383 1305 ntBASIC15.53■□□□□ 0.08
SLC28A2O43868 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC28A2O43868 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC28A2O43868 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
SLC28A2O43868 MRPS18AP1-201ENST00000414458 589 ntBASIC15.53■□□□□ 0.08
SLC28A2O43868 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
SLC28A2O43868 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.53■□□□□ 0.08
SLC28A2O43868 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC28A2O43868 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.53■□□□□ 0.08
SLC28A2O43868 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC28A2O43868 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms