Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX1O43812 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.33■□□□□ 0.04
DUX1O43812 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUX1O43812 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUX1O43812 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.33■□□□□ 0.04
DUX1O43812 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUX1O43812 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
DUX1O43812 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUX1O43812 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX1O43812 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX1O43812 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
DUX1O43812 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.33■□□□□ 0.04
DUX1O43812 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX1O43812 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
DUX1O43812 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUX1O43812 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
DUX1O43812 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.32■□□□□ 0.04
DUX1O43812 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX1O43812 RPL13P2-201ENST00000440687 659 ntBASIC15.32■□□□□ 0.04
DUX1O43812 TARDBPP1-201ENST00000442013 1203 ntBASIC15.32■□□□□ 0.04
DUX1O43812 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX1O43812 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX1O43812 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX1O43812 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX1O43812 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX1O43812 AC132938.2-201ENST00000579188 680 ntBASIC15.32■□□□□ 0.04
DUX1O43812 CTBP2P3-201ENST00000585629 1255 ntBASIC15.32■□□□□ 0.04
DUX1O43812 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 TMEM261P1-201ENST00000604899 340 ntBASIC15.32■□□□□ 0.04
DUX1O43812 AL591163.1-201ENST00000641757 987 ntBASIC15.32■□□□□ 0.04
DUX1O43812 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 AC134407.2-201ENST00000625089 1978 ntBASIC15.32■□□□□ 0.04
DUX1O43812 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 AGGF1P2-201ENST00000426656 2106 ntBASIC15.32■□□□□ 0.04
DUX1O43812 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.32■□□□□ 0.04
DUX1O43812 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX1O43812 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
DUX1O43812 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX1O43812 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
DUX1O43812 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DUX1O43812 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
DUX1O43812 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DUX1O43812 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 TTTY23B-201ENST00000442790 549 ntBASIC15.31■□□□□ 0.04
DUX1O43812 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.31■□□□□ 0.04
DUX1O43812 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.31■□□□□ 0.04
DUX1O43812 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.31■□□□□ 0.04
DUX1O43812 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX1O43812 AL450472.2-201ENST00000603663 1156 ntBASIC15.31■□□□□ 0.04
DUX1O43812 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.31■□□□□ 0.04
DUX1O43812 AL158212.4-201ENST00000624062 1286 ntBASIC15.31■□□□□ 0.04
DUX1O43812 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX1O43812 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DUX1O43812 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX1O43812 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX1O43812 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms